[INFO] fetching crate bio_files 0.2.7...
[INFO] checking bio_files-0.2.7 against master#82310651b93a594a3fd69015e1562186a080d94c for pr-145770
[INFO] extracting crate bio_files 0.2.7 into /workspace/builds/worker-5-tc1/source
[INFO] started tweaking crates.io crate bio_files 0.2.7
[INFO] finished tweaking crates.io crate bio_files 0.2.7
[INFO] tweaked toml for crates.io crate bio_files 0.2.7 written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate bio_files 0.2.7 on toolchain 82310651b93a594a3fd69015e1562186a080d94c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+82310651b93a594a3fd69015e1562186a080d94c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate bio_files 0.2.7 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+82310651b93a594a3fd69015e1562186a080d94c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
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[INFO] [stdout] 4b59855be4cdce6fc9b723c5eb3821c652acb523b382f1748cacd5897412f03a
[INFO] running `Command { std: "docker" "start" "-a" "4b59855be4cdce6fc9b723c5eb3821c652acb523b382f1748cacd5897412f03a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4b59855be4cdce6fc9b723c5eb3821c652acb523b382f1748cacd5897412f03a", kill_on_drop: false }`
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[INFO] [stdout] warning: unused variable: `ss_load_time`
[INFO] [stdout]    --> src/mmcif.rs:230:13
[INFO] [stdout]     |
[INFO] [stdout] 230 |         let ss_load_time = ss_load.elapsed();
[INFO] [stdout]     |             ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_ss_load_time`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `res`
[INFO] [stdout]    --> src/mmcif.rs:234:13
[INFO] [stdout]     |
[INFO] [stdout] 234 |         for res in &residues {
[INFO] [stdout]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_res`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `ss_load_time`
[INFO] [stdout]    --> src/mmcif.rs:230:13
[INFO] [stdout]     |
[INFO] [stdout] 230 |         let ss_load_time = ss_load.elapsed();
[INFO] [stdout]     |             ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_ss_load_time`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `res`
[INFO] [stdout]    --> src/mmcif.rs:234:13
[INFO] [stdout]     |
[INFO] [stdout] 234 |         for res in &residues {
[INFO] [stdout]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_res`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `file_version`, `tag_name`, `tag_number`, `element_type_code`, and `data_size` are never read
[INFO] [stdout]   --> src/ab1.rs:53:9
[INFO] [stdout]    |
[INFO] [stdout] 52 | struct Header {
[INFO] [stdout]    |        ------ fields in this struct
[INFO] [stdout] 53 |     pub file_version: u16,
[INFO] [stdout]    |         ^^^^^^^^^^^^
[INFO] [stdout] 54 |     pub tag_name: Seq, // 4 bytes always.
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout] 55 |     pub tag_number: u32,
[INFO] [stdout]    |         ^^^^^^^^^^
[INFO] [stdout] 56 |     pub element_type_code: u16,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 59 |     pub data_size: u32,
[INFO] [stdout]    |         ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Header` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `parse_abi_tag` is never used
[INFO] [stdout]    --> src/ab1.rs:306:4
[INFO] [stdout]     |
[INFO] [stdout] 306 | fn parse_abi_tag(data: &[u8]) -> io::Result<(String, String)> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `abi_trim` is never used
[INFO] [stdout]    --> src/ab1.rs:316:4
[INFO] [stdout]     |
[INFO] [stdout] 316 | fn abi_trim(seq_record: &fastq::Record) -> fastq::Record {
[INFO] [stdout]     |    ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `0` is never read
[INFO] [stdout]    --> src/ab1.rs:373:9
[INFO] [stdout]     |
[INFO] [stdout] 373 |     U32(Vec<u32>),
[INFO] [stdout]     |     --- ^^^^^^^^
[INFO] [stdout]     |     |
[INFO] [stdout]     |     field in this variant
[INFO] [stdout]     |
[INFO] [stdout]     = note: `TagData` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field
[INFO] [stdout]     |
[INFO] [stdout] 373 -     U32(Vec<u32>),
[INFO] [stdout] 373 +     U32(()),
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variant `U8` is never constructed
[INFO] [stdout]    --> src/ab1.rs:371:5
[INFO] [stdout]     |
[INFO] [stdout] 370 | enum TagData {
[INFO] [stdout]     |      ------- variant in this enum
[INFO] [stdout] 371 |     U8(Vec<u8>),
[INFO] [stdout]     |     ^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `TagData` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `read_string` is never used
[INFO] [stdout]    --> src/ab1.rs:428:4
[INFO] [stdout]     |
[INFO] [stdout] 428 | fn read_string<R: Read>(reader: &mut R, length: usize) -> io::Result<String> {
[INFO] [stdout]     |    ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `LoopKind` is never used
[INFO] [stdout]   --> src/mmcif_aux.rs:13:6
[INFO] [stdout]    |
[INFO] [stdout] 13 | enum LoopKind {
[INFO] [stdout]    |      ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `load_ss` is never used
[INFO] [stdout]   --> src/mmcif_aux.rs:20:8
[INFO] [stdout]    |
[INFO] [stdout] 20 | pub fn load_ss<R: Read + Seek>(mut data: R) -> io::Result<Vec<BackboneSS>> {
[INFO] [stdout]    |        ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `file_version`, `tag_name`, `tag_number`, `element_type_code`, and `data_size` are never read
[INFO] [stdout]   --> src/ab1.rs:53:9
[INFO] [stdout]    |
[INFO] [stdout] 52 | struct Header {
[INFO] [stdout]    |        ------ fields in this struct
[INFO] [stdout] 53 |     pub file_version: u16,
[INFO] [stdout]    |         ^^^^^^^^^^^^
[INFO] [stdout] 54 |     pub tag_name: Seq, // 4 bytes always.
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout] 55 |     pub tag_number: u32,
[INFO] [stdout]    |         ^^^^^^^^^^
[INFO] [stdout] 56 |     pub element_type_code: u16,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 59 |     pub data_size: u32,
[INFO] [stdout]    |         ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Header` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `parse_abi_tag` is never used
[INFO] [stdout]    --> src/ab1.rs:306:4
[INFO] [stdout]     |
[INFO] [stdout] 306 | fn parse_abi_tag(data: &[u8]) -> io::Result<(String, String)> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `abi_trim` is never used
[INFO] [stdout]    --> src/ab1.rs:316:4
[INFO] [stdout]     |
[INFO] [stdout] 316 | fn abi_trim(seq_record: &fastq::Record) -> fastq::Record {
[INFO] [stdout]     |    ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `0` is never read
[INFO] [stdout]    --> src/ab1.rs:373:9
[INFO] [stdout]     |
[INFO] [stdout] 373 |     U32(Vec<u32>),
[INFO] [stdout]     |     --- ^^^^^^^^
[INFO] [stdout]     |     |
[INFO] [stdout]     |     field in this variant
[INFO] [stdout]     |
[INFO] [stdout]     = note: `TagData` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field
[INFO] [stdout]     |
[INFO] [stdout] 373 -     U32(Vec<u32>),
[INFO] [stdout] 373 +     U32(()),
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variant `U8` is never constructed
[INFO] [stdout]    --> src/ab1.rs:371:5
[INFO] [stdout]     |
[INFO] [stdout] 370 | enum TagData {
[INFO] [stdout]     |      ------- variant in this enum
[INFO] [stdout] 371 |     U8(Vec<u8>),
[INFO] [stdout]     |     ^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `TagData` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `read_string` is never used
[INFO] [stdout]    --> src/ab1.rs:428:4
[INFO] [stdout]     |
[INFO] [stdout] 428 | fn read_string<R: Read>(reader: &mut R, length: usize) -> io::Result<String> {
[INFO] [stdout]     |    ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `LoopKind` is never used
[INFO] [stdout]   --> src/mmcif_aux.rs:13:6
[INFO] [stdout]    |
[INFO] [stdout] 13 | enum LoopKind {
[INFO] [stdout]    |      ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `load_ss` is never used
[INFO] [stdout]   --> src/mmcif_aux.rs:20:8
[INFO] [stdout]    |
[INFO] [stdout] 20 | pub fn load_ss<R: Read + Seek>(mut data: R) -> io::Result<Vec<BackboneSS>> {
[INFO] [stdout]    |        ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 53.21s
[INFO] running `Command { std: "docker" "inspect" "fc31d0be9df50befc7a25a3ff9e868468ec241a01c897b71ab000ecd2861f775", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fc31d0be9df50befc7a25a3ff9e868468ec241a01c897b71ab000ecd2861f775", kill_on_drop: false }`
[INFO] [stdout] fc31d0be9df50befc7a25a3ff9e868468ec241a01c897b71ab000ecd2861f775
